That is really cool.
It reminds me, though. Did they ever answer the question of what happens to the real people who get taken over by agents? Do they die instantly IRL? Or are they conscious through it?
After an Agent jumps back out of the bluepill, the person is left confused, disoriented, but very much alive and with their identity intact. There's a comic about one guy who gets possessed multiple times, repeatedly finding himself surrounded by death and destruction he presumably caused himself. He comes to believe himself to be some sort of holy avenger, all Ghost Rider style. But he only has vague flashes of what happened while possessed.
Similarly, those who were over-written by Smith were reverted to their original state after Revolutions. Most had their memories wiped, but some - especially programs - retained some amount of recall of the incident, at least per MXO's installer.
There was also a subplot about humans that were overwritten by other types of programs, who were more or less exorcised by Seraph - almost none of them recalled anything that happened while having been replaced.
There was one notable exception who did retain the memories - but if you get me talking about Cryptos, it could take multiple paragraphs. Legitimately one of my favorite characters in the franchise, with no presence at all in any other works. At least - not yet.